Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.03□□□□□ -0.16
Shox2P70390 Gm11780-201ENSMUST00000136880 516 ntBASIC14.03□□□□□ -0.16
Shox2P70390 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Shox2P70390 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shox2P70390 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shox2P70390 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shox2P70390 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.02□□□□□ -0.16
Shox2P70390 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.02□□□□□ -0.16
Shox2P70390 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.02□□□□□ -0.16
Shox2P70390 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.02□□□□□ -0.16
Shox2P70390 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shox2P70390 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.02□□□□□ -0.16
Shox2P70390 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Shox2P70390 Gm15372-201ENSMUST00000120729 834 ntBASIC14.02□□□□□ -0.17
Shox2P70390 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.02□□□□□ -0.17
Shox2P70390 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
Shox2P70390 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.02□□□□□ -0.17
Shox2P70390 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shox2P70390 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shox2P70390 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shox2P70390 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.01□□□□□ -0.17
Shox2P70390 Gm37153-201ENSMUST00000193637 231 ntBASIC14.01□□□□□ -0.17
Shox2P70390 Gm45747-201ENSMUST00000212203 999 ntBASIC14.01□□□□□ -0.17
Shox2P70390 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.01□□□□□ -0.17
Shox2P70390 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.01□□□□□ -0.17
Shox2P70390 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shox2P70390 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shox2P70390 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.01□□□□□ -0.17
Shox2P70390 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Gm13730-201ENSMUST00000121036 1462 ntBASIC14□□□□□ -0.17
Shox2P70390 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14□□□□□ -0.17
Shox2P70390 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shox2P70390 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Gm10275-202ENSMUST00000168697 495 ntBASIC14□□□□□ -0.17
Shox2P70390 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms