Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rad50P70388 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rad50P70388 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.04■□□□□ 0.32
Rad50P70388 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rad50P70388 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.04■□□□□ 0.32
Rad50P70388 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rad50P70388 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rad50P70388 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rad50P70388 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Rad50P70388 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Rad50P70388 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Rad50P70388 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.03■□□□□ 0.32
Rad50P70388 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.03■□□□□ 0.32
Rad50P70388 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.03■□□□□ 0.32
Rad50P70388 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rad50P70388 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rad50P70388 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rad50P70388 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rad50P70388 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rad50P70388 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rad50P70388 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rad50P70388 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.02■□□□□ 0.32
Rad50P70388 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rad50P70388 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.02■□□□□ 0.32
Rad50P70388 Gm27989-201ENSMUST00000184721 107 ntBASIC17.02■□□□□ 0.32
Rad50P70388 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rad50P70388 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.02■□□□□ 0.32
Rad50P70388 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rad50P70388 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rad50P70388 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rad50P70388 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Rad50P70388 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rad50P70388 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rad50P70388 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Rad50P70388 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rad50P70388 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.02■□□□□ 0.31
Rad50P70388 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rad50P70388 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.02■□□□□ 0.31
Rad50P70388 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rad50P70388 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Rad50P70388 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rad50P70388 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.01■□□□□ 0.31
Rad50P70388 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rad50P70388 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Gm18766-201ENSMUST00000189811 808 ntBASIC17.01■□□□□ 0.31
Rad50P70388 Gm38294-201ENSMUST00000192831 381 ntBASIC17.01■□□□□ 0.31
Rad50P70388 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.01■□□□□ 0.31
Rad50P70388 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rad50P70388 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rad50P70388 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Rad50P70388 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Rad50P70388 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rad50P70388 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.01■□□□□ 0.31
Rad50P70388 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rad50P70388 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17■□□□□ 0.31
Rad50P70388 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rad50P70388 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rad50P70388 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rad50P70388 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rad50P70388 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rad50P70388 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms