Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm2651-201ENSMUST00000203560 838 ntBASIC14.06□□□□□ -0.16
Crnkl1P63154 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.06□□□□□ -0.16
Crnkl1P63154 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.06□□□□□ -0.16
Crnkl1P63154 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Crnkl1P63154 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Crnkl1P63154 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Mir5131-201ENSMUST00000175426 93 ntBASIC14.05□□□□□ -0.16
Crnkl1P63154 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Crnkl1P63154 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.05□□□□□ -0.16
Crnkl1P63154 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crnkl1P63154 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Crnkl1P63154 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Crnkl1P63154 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Crnkl1P63154 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.04□□□□□ -0.16
Crnkl1P63154 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Crnkl1P63154 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Gm44771-201ENSMUST00000206975 626 ntBASIC14.04□□□□□ -0.16
Crnkl1P63154 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Crnkl1P63154 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Crnkl1P63154 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Crnkl1P63154 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Crnkl1P63154 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crnkl1P63154 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms