Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lhx1P63006 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Gm7488-201ENSMUST00000117148 684 ntBASIC13.92□□□□□ -0.18
Lhx1P63006 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Gm10766-202ENSMUST00000194123 606 ntBASIC13.92□□□□□ -0.18
Lhx1P63006 Gm37714-201ENSMUST00000194742 342 ntBASIC13.92□□□□□ -0.18
Lhx1P63006 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.92□□□□□ -0.18
Lhx1P63006 Gm44855-201ENSMUST00000205725 362 ntBASIC13.92□□□□□ -0.18
Lhx1P63006 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.92□□□□□ -0.18
Lhx1P63006 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Lhx1P63006 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lhx1P63006 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.92□□□□□ -0.18
Lhx1P63006 Syt7-205ENSMUST00000224135 1557 ntBASIC13.92□□□□□ -0.18
Lhx1P63006 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.91□□□□□ -0.18
Lhx1P63006 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.91□□□□□ -0.18
Lhx1P63006 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.91□□□□□ -0.18
Lhx1P63006 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.91□□□□□ -0.18
Lhx1P63006 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Lhx1P63006 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Lhx1P63006 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.91□□□□□ -0.18
Lhx1P63006 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lhx1P63006 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.91□□□□□ -0.18
Lhx1P63006 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.9□□□□□ -0.18
Lhx1P63006 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.9□□□□□ -0.18
Lhx1P63006 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lhx1P63006 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.9□□□□□ -0.18
Lhx1P63006 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Lhx1P63006 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.9□□□□□ -0.18
Lhx1P63006 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lhx1P63006 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.9□□□□□ -0.18
Lhx1P63006 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.9□□□□□ -0.18
Lhx1P63006 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.9□□□□□ -0.18
Lhx1P63006 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Lhx1P63006 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.9□□□□□ -0.18
Lhx1P63006 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lhx1P63006 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Lhx1P63006 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Lhx1P63006 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Lhx1P63006 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Lhx1P63006 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lhx1P63006 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lhx1P63006 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lhx1P63006 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lhx1P63006 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lhx1P63006 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lhx1P63006 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms