Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lsm6P62313 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Gm6222-201ENSMUST00000120787 396 ntBASIC12.46□□□□□ -0.41
Lsm6P62313 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.46□□□□□ -0.41
Lsm6P62313 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lsm6P62313 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.46□□□□□ -0.41
Lsm6P62313 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.46□□□□□ -0.41
Lsm6P62313 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lsm6P62313 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lsm6P62313 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lsm6P62313 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lsm6P62313 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Lsm6P62313 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.46□□□□□ -0.42
Lsm6P62313 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.46□□□□□ -0.42
Lsm6P62313 Rubie-203ENSMUST00000227803 2430 ntBASIC12.46□□□□□ -0.42
Lsm6P62313 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm6P62313 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm6P62313 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Lsm6P62313 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Lsm6P62313 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lsm6P62313 Gm22065-201ENSMUST00000103753 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm22066-201ENSMUST00000103761 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm24932-201ENSMUST00000103763 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm24115-201ENSMUST00000103799 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm22190-201ENSMUST00000103827 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm22191-201ENSMUST00000103831 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm24721-201ENSMUST00000103849 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm28018-201ENSMUST00000103869 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm26399-201ENSMUST00000103937 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.45□□□□□ -0.42
Lsm6P62313 Gm13015-201ENSMUST00000118674 204 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Lsm6P62313 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.45□□□□□ -0.42
Lsm6P62313 Gm25349-201ENSMUST00000177728 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm23616-201ENSMUST00000177797 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm25871-201ENSMUST00000177816 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm24752-201ENSMUST00000178240 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm24496-201ENSMUST00000178287 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm25649-201ENSMUST00000178476 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm25548-201ENSMUST00000178681 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm23147-201ENSMUST00000178841 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm26095-201ENSMUST00000179270 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm22171-201ENSMUST00000179283 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm23936-201ENSMUST00000179354 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm22619-201ENSMUST00000179516 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm25255-201ENSMUST00000179579 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm24755-201ENSMUST00000179691 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm26506-201ENSMUST00000179692 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm25086-201ENSMUST00000179931 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm23243-201ENSMUST00000180047 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm24659-201ENSMUST00000180212 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm24169-201ENSMUST00000180244 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm23689-201ENSMUST00000180354 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.45□□□□□ -0.42
Lsm6P62313 Gm27359-201ENSMUST00000184153 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm27785-201ENSMUST00000184268 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm27466-201ENSMUST00000184396 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm27703-201ENSMUST00000184836 110 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 Gm44335-201ENSMUST00000196879 141 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm44297-201ENSMUST00000198304 141 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Gm44346-201ENSMUST00000198851 141 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.45□□□□□ -0.42
Lsm6P62313 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm6P62313 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms