Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.54□□□□□ -0.4
Sec61a1P61620 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.54□□□□□ -0.4
Sec61a1P61620 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a1P61620 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.53□□□□□ -0.4
Sec61a1P61620 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a1P61620 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.53□□□□□ -0.4
Sec61a1P61620 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61a1P61620 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.53□□□□□ -0.4
Sec61a1P61620 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61a1P61620 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a1P61620 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.53□□□□□ -0.4
Sec61a1P61620 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a1P61620 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a1P61620 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a1P61620 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.52□□□□□ -0.4
Sec61a1P61620 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.52□□□□□ -0.4
Sec61a1P61620 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a1P61620 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.52□□□□□ -0.41
Sec61a1P61620 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Sec61a1P61620 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.52□□□□□ -0.41
Sec61a1P61620 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sec61a1P61620 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sec61a1P61620 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a1P61620 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Sec61a1P61620 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.51□□□□□ -0.41
Sec61a1P61620 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.51□□□□□ -0.41
Sec61a1P61620 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a1P61620 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.51□□□□□ -0.41
Sec61a1P61620 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.51□□□□□ -0.41
Sec61a1P61620 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a1P61620 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.51□□□□□ -0.41
Sec61a1P61620 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.51□□□□□ -0.41
Sec61a1P61620 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms