Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nup43P59235 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.41□□□□□ -0.26
Nup43P59235 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nup43P59235 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nup43P59235 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup43P59235 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.4□□□□□ -0.26
Nup43P59235 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.4□□□□□ -0.26
Nup43P59235 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nup43P59235 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup43P59235 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup43P59235 AA543401-201ENSMUST00000164248 1269 ntBASIC13.4□□□□□ -0.26
Nup43P59235 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.4□□□□□ -0.26
Nup43P59235 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nup43P59235 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nup43P59235 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nup43P59235 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup43P59235 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nup43P59235 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Nup43P59235 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.39□□□□□ -0.27
Nup43P59235 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.39□□□□□ -0.27
Nup43P59235 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.39□□□□□ -0.27
Nup43P59235 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nup43P59235 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.39□□□□□ -0.27
Nup43P59235 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.39□□□□□ -0.27
Nup43P59235 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nup43P59235 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nup43P59235 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.39□□□□□ -0.27
Nup43P59235 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Nup43P59235 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup43P59235 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup43P59235 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.39□□□□□ -0.27
Nup43P59235 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Nup43P59235 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nup43P59235 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Gm15653-201ENSMUST00000119247 907 ntBASIC13.38□□□□□ -0.27
Nup43P59235 Gm12428-201ENSMUST00000119844 727 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms