Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Nub1P54729 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.29■□□□□ 0.04
Nub1P54729 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Nub1P54729 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.29■□□□□ 0.04
Nub1P54729 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nub1P54729 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nub1P54729 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Nub1P54729 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.28■□□□□ 0.04
Nub1P54729 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.28■□□□□ 0.04
Nub1P54729 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.28■□□□□ 0.04
Nub1P54729 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Gm22175-201ENSMUST00000175007 78 ntBASIC15.28■□□□□ 0.04
Nub1P54729 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.28■□□□□ 0.04
Nub1P54729 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.28■□□□□ 0.04
Nub1P54729 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nub1P54729 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nub1P54729 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nub1P54729 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nub1P54729 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Nub1P54729 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.27■□□□□ 0.04
Nub1P54729 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nub1P54729 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nub1P54729 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nub1P54729 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nub1P54729 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nub1P54729 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nub1P54729 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.27■□□□□ 0.04
Nub1P54729 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nub1P54729 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nub1P54729 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nub1P54729 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nub1P54729 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nub1P54729 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nub1P54729 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nub1P54729 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.27■□□□□ 0.03
Nub1P54729 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nub1P54729 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.26■□□□□ 0.03
Nub1P54729 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Gm38294-201ENSMUST00000192831 381 ntBASIC15.26■□□□□ 0.03
Nub1P54729 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.26■□□□□ 0.03
Nub1P54729 Gm45453-201ENSMUST00000211758 853 ntBASIC15.26■□□□□ 0.03
Nub1P54729 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.26■□□□□ 0.03
Nub1P54729 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nub1P54729 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms