Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pdx1P52946 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.04□□□□□ -0.16
Pdx1P52946 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.04□□□□□ -0.16
Pdx1P52946 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pdx1P52946 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.04□□□□□ -0.16
Pdx1P52946 Mir1897-201ENSMUST00000122581 272 ntBASIC14.04□□□□□ -0.16
Pdx1P52946 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pdx1P52946 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.04□□□□□ -0.16
Pdx1P52946 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pdx1P52946 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdx1P52946 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.04□□□□□ -0.16
Pdx1P52946 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdx1P52946 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdx1P52946 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Gm13223-201ENSMUST00000118609 747 ntBASIC14.03□□□□□ -0.16
Pdx1P52946 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.03□□□□□ -0.16
Pdx1P52946 Mir6956-201ENSMUST00000183598 62 ntBASIC14.03□□□□□ -0.16
Pdx1P52946 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pdx1P52946 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pdx1P52946 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pdx1P52946 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pdx1P52946 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Pdx1P52946 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.03□□□□□ -0.16
Pdx1P52946 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdx1P52946 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pdx1P52946 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdx1P52946 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Pdx1P52946 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.02□□□□□ -0.17
Pdx1P52946 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pdx1P52946 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdx1P52946 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pdx1P52946 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pdx1P52946 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms