Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.99□□□□□ -0.01
Shmt1P50431 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.99□□□□□ -0.01
Shmt1P50431 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shmt1P50431 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shmt1P50431 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.99□□□□□ -0.01
Shmt1P50431 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.99□□□□□ -0.01
Shmt1P50431 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Shmt1P50431 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shmt1P50431 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.99□□□□□ -0.01
Shmt1P50431 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shmt1P50431 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Shmt1P50431 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.99□□□□□ -0.01
Shmt1P50431 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shmt1P50431 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Shmt1P50431 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shmt1P50431 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Shmt1P50431 Gm16215-201ENSMUST00000161990 637 ntBASIC14.98□□□□□ -0.01
Shmt1P50431 Gm5745-201ENSMUST00000183748 313 ntBASIC14.98□□□□□ -0.01
Shmt1P50431 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.98□□□□□ -0.01
Shmt1P50431 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Shmt1P50431 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Shmt1P50431 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shmt1P50431 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.98□□□□□ -0.01
Shmt1P50431 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Shmt1P50431 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shmt1P50431 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Shmt1P50431 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms