Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Brca1P48754 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Brca1P48754 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.64■□□□□ 0.09
Brca1P48754 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.64■□□□□ 0.09
Brca1P48754 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.64■□□□□ 0.09
Brca1P48754 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.64■□□□□ 0.09
Brca1P48754 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.64■□□□□ 0.09
Brca1P48754 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brca1P48754 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Brca1P48754 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.63■□□□□ 0.09
Brca1P48754 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Brca1P48754 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Gm12997-201ENSMUST00000120207 640 ntBASIC15.63■□□□□ 0.09
Brca1P48754 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.63■□□□□ 0.09
Brca1P48754 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.63■□□□□ 0.09
Brca1P48754 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.63■□□□□ 0.09
Brca1P48754 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.63■□□□□ 0.09
Brca1P48754 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.63■□□□□ 0.09
Brca1P48754 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brca1P48754 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.62■□□□□ 0.09
Brca1P48754 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Brca1P48754 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Brca1P48754 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Brca1P48754 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Brca1P48754 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Brca1P48754 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Brca1P48754 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Brca1P48754 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Brca1P48754 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Brca1P48754 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.62■□□□□ 0.09
Brca1P48754 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.62■□□□□ 0.09
Brca1P48754 Gm17330-201ENSMUST00000221047 165 ntBASIC15.62■□□□□ 0.09
Brca1P48754 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.62■□□□□ 0.09
Brca1P48754 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Brca1P48754 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brca1P48754 Mir698-201ENSMUST00000102164 109 ntBASIC15.61■□□□□ 0.09
Brca1P48754 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Brca1P48754 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.61■□□□□ 0.09
Brca1P48754 Gm11618-201ENSMUST00000117946 267 ntBASIC15.61■□□□□ 0.09
Brca1P48754 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.61■□□□□ 0.09
Brca1P48754 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.61■□□□□ 0.09
Brca1P48754 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.61■□□□□ 0.09
Brca1P48754 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.61■□□□□ 0.09
Brca1P48754 Gm6621-201ENSMUST00000193251 772 ntBASIC15.61■□□□□ 0.09
Brca1P48754 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.61■□□□□ 0.09
Brca1P48754 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Brca1P48754 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms