Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.41□□□□□ -0.1
Vps4bP46467 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.41□□□□□ -0.1
Vps4bP46467 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.41□□□□□ -0.1
Vps4bP46467 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.41□□□□□ -0.1
Vps4bP46467 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Vps4bP46467 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Vps4bP46467 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.41□□□□□ -0.1
Vps4bP46467 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.41□□□□□ -0.1
Vps4bP46467 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.41□□□□□ -0.1
Vps4bP46467 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.41□□□□□ -0.1
Vps4bP46467 Gm17271-201ENSMUST00000165535 355 ntBASIC14.41□□□□□ -0.1
Vps4bP46467 Mir3113-201ENSMUST00000175478 76 ntBASIC14.41□□□□□ -0.1
Vps4bP46467 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.41□□□□□ -0.1
Vps4bP46467 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Vps4bP46467 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Vps4bP46467 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Vps4bP46467 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4bP46467 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vps4bP46467 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.4□□□□□ -0.1
Vps4bP46467 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Gm11025-201ENSMUST00000140773 466 ntBASIC14.4□□□□□ -0.1
Vps4bP46467 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.4□□□□□ -0.1
Vps4bP46467 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.4□□□□□ -0.1
Vps4bP46467 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vps4bP46467 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps4bP46467 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps4bP46467 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Vps4bP46467 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vps4bP46467 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.39□□□□□ -0.11
Vps4bP46467 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.39□□□□□ -0.11
Vps4bP46467 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps4bP46467 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.39□□□□□ -0.11
Vps4bP46467 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.39□□□□□ -0.11
Vps4bP46467 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.39□□□□□ -0.11
Vps4bP46467 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vps4bP46467 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps4bP46467 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.39□□□□□ -0.11
Vps4bP46467 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Vps4bP46467 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.39□□□□□ -0.11
Vps4bP46467 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms