Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Cdx2P43241 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.43□□□□□ -0.26
Cdx2P43241 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.43□□□□□ -0.26
Cdx2P43241 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 Gm17420-201ENSMUST00000164753 153 ntBASIC13.43□□□□□ -0.26
Cdx2P43241 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdx2P43241 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Cdx2P43241 Gm8927-201ENSMUST00000181978 981 ntBASIC13.43□□□□□ -0.26
Cdx2P43241 Gm27731-201ENSMUST00000185192 107 ntBASIC13.43□□□□□ -0.26
Cdx2P43241 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdx2P43241 Gm42693-201ENSMUST00000196779 631 ntBASIC13.43□□□□□ -0.26
Cdx2P43241 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.43□□□□□ -0.26
Cdx2P43241 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdx2P43241 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.43□□□□□ -0.26
Cdx2P43241 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 Gm3222-201ENSMUST00000071282 990 ntBASIC13.43□□□□□ -0.26
Cdx2P43241 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cdx2P43241 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx2P43241 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdx2P43241 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdx2P43241 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdx2P43241 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdx2P43241 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.42□□□□□ -0.26
Cdx2P43241 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Cdx2P43241 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdx2P43241 Gm13689-201ENSMUST00000119360 685 ntBASIC13.42□□□□□ -0.26
Cdx2P43241 Gm26464-201ENSMUST00000157094 305 ntBASIC13.42□□□□□ -0.26
Cdx2P43241 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.42□□□□□ -0.26
Cdx2P43241 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.42□□□□□ -0.26
Cdx2P43241 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.42□□□□□ -0.26
Cdx2P43241 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.42□□□□□ -0.26
Cdx2P43241 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx2P43241 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdx2P43241 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdx2P43241 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.41□□□□□ -0.26
Cdx2P43241 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdx2P43241 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.41□□□□□ -0.26
Cdx2P43241 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdx2P43241 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.41□□□□□ -0.26
Cdx2P43241 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.41□□□□□ -0.26
Cdx2P43241 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdx2P43241 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdx2P43241 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdx2P43241 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.41□□□□□ -0.26
Cdx2P43241 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdx2P43241 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdx2P43241 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms