Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.02□□□□□ -0.33
Nkx2-2P42586 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.02□□□□□ -0.33
Nkx2-2P42586 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.02□□□□□ -0.33
Nkx2-2P42586 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.01□□□□□ -0.33
Nkx2-2P42586 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.01□□□□□ -0.33
Nkx2-2P42586 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Gm22175-201ENSMUST00000175007 78 ntBASIC13.01□□□□□ -0.33
Nkx2-2P42586 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx2-2P42586 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.01□□□□□ -0.33
Nkx2-2P42586 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-2P42586 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Mmp14-206ENSMUST00000225641 3238 ntBASIC13□□□□□ -0.33
Nkx2-2P42586 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Nkx2-2P42586 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nkx2-2P42586 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Nkx2-2P42586 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Nkx2-2P42586 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 Gm45667-201ENSMUST00000210380 1316 ntBASIC13□□□□□ -0.33
Nkx2-2P42586 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13□□□□□ -0.33
Nkx2-2P42586 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Gm15653-201ENSMUST00000119247 907 ntBASIC13□□□□□ -0.33
Nkx2-2P42586 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13□□□□□ -0.33
Nkx2-2P42586 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13□□□□□ -0.33
Nkx2-2P42586 AC121804.3-201ENSMUST00000223420 295 ntBASIC13□□□□□ -0.33
Nkx2-2P42586 Shd-206ENSMUST00000225145 998 ntBASIC13□□□□□ -0.33
Nkx2-2P42586 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Nkx2-2P42586 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nkx2-2P42586 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13□□□□□ -0.33
Nkx2-2P42586 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nkx2-2P42586 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms