Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Abca1P41233 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Abca1P41233 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.83□□□□□ -0.52
Abca1P41233 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.83□□□□□ -0.52
Abca1P41233 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Abca1P41233 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.82□□□□□ -0.52
Abca1P41233 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.82□□□□□ -0.52
Abca1P41233 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Abca1P41233 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Abca1P41233 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.82□□□□□ -0.52
Abca1P41233 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Abca1P41233 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Abca1P41233 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.82□□□□□ -0.52
Abca1P41233 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.82□□□□□ -0.52
Abca1P41233 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Abca1P41233 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abca1P41233 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Mir1938-201ENSMUST00000158746 100 ntBASIC11.81□□□□□ -0.52
Abca1P41233 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.81□□□□□ -0.52
Abca1P41233 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Gm9522-201ENSMUST00000182394 926 ntBASIC11.81□□□□□ -0.52
Abca1P41233 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Abca1P41233 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Abca1P41233 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.81□□□□□ -0.52
Abca1P41233 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.81□□□□□ -0.52
Abca1P41233 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.81□□□□□ -0.52
Abca1P41233 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms