Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14□□□□□ -0.17
HmgclP38060 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.99□□□□□ -0.17
HmgclP38060 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HmgclP38060 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HmgclP38060 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.99□□□□□ -0.17
HmgclP38060 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.99□□□□□ -0.17
HmgclP38060 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HmgclP38060 Gm25144-201ENSMUST00000179561 110 ntBASIC13.99□□□□□ -0.17
HmgclP38060 Gm25352-201ENSMUST00000179815 110 ntBASIC13.99□□□□□ -0.17
HmgclP38060 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.99□□□□□ -0.17
HmgclP38060 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.99□□□□□ -0.17
HmgclP38060 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.99□□□□□ -0.17
HmgclP38060 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.99□□□□□ -0.17
HmgclP38060 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HmgclP38060 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Gm27533-201ENSMUST00000183800 152 ntBASIC13.98□□□□□ -0.17
HmgclP38060 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.98□□□□□ -0.17
HmgclP38060 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.98□□□□□ -0.17
HmgclP38060 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.98□□□□□ -0.17
HmgclP38060 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HmgclP38060 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HmgclP38060 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HmgclP38060 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HmgclP38060 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
HmgclP38060 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
HmgclP38060 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.97□□□□□ -0.17
HmgclP38060 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HmgclP38060 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
HmgclP38060 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Gm15653-201ENSMUST00000119247 907 ntBASIC13.97□□□□□ -0.17
HmgclP38060 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.97□□□□□ -0.17
HmgclP38060 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Gm22175-201ENSMUST00000175007 78 ntBASIC13.97□□□□□ -0.17
HmgclP38060 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.97□□□□□ -0.17
HmgclP38060 Shd-206ENSMUST00000225145 998 ntBASIC13.97□□□□□ -0.17
HmgclP38060 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HmgclP38060 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HmgclP38060 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
HmgclP38060 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HmgclP38060 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms