Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.06□□□□□ -0.32
Sftpa1P35242 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Sftpa1P35242 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Sftpa1P35242 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Gm15376-201ENSMUST00000122258 783 ntBASIC13.05□□□□□ -0.32
Sftpa1P35242 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Gm29127-201ENSMUST00000188304 517 ntBASIC13.05□□□□□ -0.32
Sftpa1P35242 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.05□□□□□ -0.32
Sftpa1P35242 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.05□□□□□ -0.32
Sftpa1P35242 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.05□□□□□ -0.32
Sftpa1P35242 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.05□□□□□ -0.32
Sftpa1P35242 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sftpa1P35242 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sftpa1P35242 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm13689-201ENSMUST00000119360 685 ntBASIC13.04□□□□□ -0.32
Sftpa1P35242 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm18905-201ENSMUST00000205454 928 ntBASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm19078-201ENSMUST00000206311 727 ntBASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.04□□□□□ -0.32
Sftpa1P35242 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms