Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vcam1P29533 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.23■□□□□ 0.19
Vcam1P29533 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Vcam1P29533 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Vcam1P29533 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.22■□□□□ 0.19
Vcam1P29533 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.22■□□□□ 0.19
Vcam1P29533 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.22■□□□□ 0.19
Vcam1P29533 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.22■□□□□ 0.19
Vcam1P29533 Mir1894-201ENSMUST00000122802 81 ntBASIC16.22■□□□□ 0.19
Vcam1P29533 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.22■□□□□ 0.19
Vcam1P29533 Gm15429-201ENSMUST00000151268 798 ntBASIC16.22■□□□□ 0.19
Vcam1P29533 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Gm27772-201ENSMUST00000184900 187 ntBASIC16.22■□□□□ 0.19
Vcam1P29533 Gm29741-201ENSMUST00000192667 421 ntBASIC16.22■□□□□ 0.19
Vcam1P29533 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
Vcam1P29533 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vcam1P29533 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcam1P29533 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.21■□□□□ 0.19
Vcam1P29533 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.21■□□□□ 0.19
Vcam1P29533 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.21■□□□□ 0.19
Vcam1P29533 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Vcam1P29533 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.21■□□□□ 0.19
Vcam1P29533 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vcam1P29533 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vcam1P29533 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcam1P29533 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vcam1P29533 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.21■□□□□ 0.18
Vcam1P29533 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.2■□□□□ 0.18
Vcam1P29533 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vcam1P29533 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.2■□□□□ 0.18
Vcam1P29533 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vcam1P29533 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Gm15824-201ENSMUST00000119516 955 ntBASIC16.2■□□□□ 0.18
Vcam1P29533 Gm12485-201ENSMUST00000119641 291 ntBASIC16.2■□□□□ 0.18
Vcam1P29533 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.2■□□□□ 0.18
Vcam1P29533 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.2■□□□□ 0.18
Vcam1P29533 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcam1P29533 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.19■□□□□ 0.18
Vcam1P29533 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms