Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nfkb1P25799 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Gm15957-201ENSMUST00000118893 974 ntBASIC14.57□□□□□ -0.08
Nfkb1P25799 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Gm14928-201ENSMUST00000120198 477 ntBASIC14.57□□□□□ -0.08
Nfkb1P25799 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.57□□□□□ -0.08
Nfkb1P25799 Gm9797-201ENSMUST00000052902 613 ntBASIC14.57□□□□□ -0.08
Nfkb1P25799 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.57□□□□□ -0.08
Nfkb1P25799 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nfkb1P25799 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Gm12585-201ENSMUST00000117307 290 ntBASIC14.56□□□□□ -0.08
Nfkb1P25799 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.56□□□□□ -0.08
Nfkb1P25799 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Gm10766-202ENSMUST00000194123 606 ntBASIC14.56□□□□□ -0.08
Nfkb1P25799 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.56□□□□□ -0.08
Nfkb1P25799 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.56□□□□□ -0.08
Nfkb1P25799 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nfkb1P25799 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nfkb1P25799 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Gm28760-201ENSMUST00000185995 736 ntBASIC14.55□□□□□ -0.08
Nfkb1P25799 Gm9794-201ENSMUST00000202370 423 ntBASIC14.55□□□□□ -0.08
Nfkb1P25799 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Gm7653-201ENSMUST00000214567 508 ntBASIC14.55□□□□□ -0.08
Nfkb1P25799 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Nfkb1P25799 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nfkb1P25799 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms