Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
P20040 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.62□□□□□ -0.39
P20040 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.62□□□□□ -0.39
P20040 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
P20040 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.62□□□□□ -0.39
P20040 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.62□□□□□ -0.39
P20040 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.62□□□□□ -0.39
P20040 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.62□□□□□ -0.39
P20040 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
P20040 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
P20040 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
P20040 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
P20040 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.62□□□□□ -0.39
P20040 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.62□□□□□ -0.39
P20040 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
P20040 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
P20040 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
P20040 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
P20040 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
P20040 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
P20040 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
P20040 Chchd1-203ENSMUST00000224633 557 ntBASIC12.61□□□□□ -0.39
P20040 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.61□□□□□ -0.39
P20040 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.61□□□□□ -0.39
P20040 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
P20040 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P20040 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
P20040 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.6□□□□□ -0.39
P20040 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
P20040 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
P20040 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
P20040 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.6□□□□□ -0.39
P20040 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.6□□□□□ -0.39
P20040 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
P20040 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
P20040 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P20040 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.6□□□□□ -0.39
P20040 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P20040 Rprl2-201ENSMUST00000157150 290 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms