Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp53P15975 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp53P15975 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp53P15975 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp53P15975 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp53P15975 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.4■□□□□ 0.22
Usp53P15975 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.39■□□□□ 0.22
Usp53P15975 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Usp53P15975 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp53P15975 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp53P15975 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Usp53P15975 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.39■□□□□ 0.21
Usp53P15975 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp53P15975 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp53P15975 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.39■□□□□ 0.21
Usp53P15975 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp53P15975 Gm37714-201ENSMUST00000194742 342 ntBASIC16.39■□□□□ 0.21
Usp53P15975 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp53P15975 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp53P15975 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.39■□□□□ 0.21
Usp53P15975 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp53P15975 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.39■□□□□ 0.21
Usp53P15975 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.39■□□□□ 0.21
Usp53P15975 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp53P15975 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp53P15975 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp53P15975 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.38■□□□□ 0.21
Usp53P15975 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Usp53P15975 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Usp53P15975 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.38■□□□□ 0.21
Usp53P15975 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Usp53P15975 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp53P15975 Gm28760-201ENSMUST00000185995 736 ntBASIC16.38■□□□□ 0.21
Usp53P15975 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.38■□□□□ 0.21
Usp53P15975 Gm44608-201ENSMUST00000206827 855 ntBASIC16.38■□□□□ 0.21
Usp53P15975 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.38■□□□□ 0.21
Usp53P15975 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp53P15975 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp53P15975 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp53P15975 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp53P15975 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp53P15975 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp53P15975 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Gm14928-201ENSMUST00000120198 477 ntBASIC16.37■□□□□ 0.21
Usp53P15975 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.37■□□□□ 0.21
Usp53P15975 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.37■□□□□ 0.21
Usp53P15975 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Usp53P15975 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.37■□□□□ 0.21
Usp53P15975 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.37■□□□□ 0.21
Usp53P15975 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp53P15975 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Usp53P15975 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.37■□□□□ 0.21
Usp53P15975 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Usp53P15975 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.37■□□□□ 0.21
Usp53P15975 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.37■□□□□ 0.21
Usp53P15975 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp53P15975 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp53P15975 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms