Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11□□□□□ -0.65
Ccl1P10146 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Gm37644-201ENSMUST00000192190 2270 ntBASIC11□□□□□ -0.65
Ccl1P10146 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11□□□□□ -0.65
Ccl1P10146 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11□□□□□ -0.65
Ccl1P10146 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Ccl1P10146 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Gm8749-201ENSMUST00000117737 331 ntBASIC11□□□□□ -0.65
Ccl1P10146 Gm14042-201ENSMUST00000120139 833 ntBASIC11□□□□□ -0.65
Ccl1P10146 Gm25016-201ENSMUST00000158399 131 ntBASIC11□□□□□ -0.65
Ccl1P10146 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Ccl1P10146 Gm6296-201ENSMUST00000222599 943 ntBASIC11□□□□□ -0.65
Ccl1P10146 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11□□□□□ -0.65
Ccl1P10146 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccl1P10146 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Ccl1P10146 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl1P10146 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccl1P10146 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Ccl1P10146 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccl1P10146 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ccl1P10146 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.99□□□□□ -0.65
Ccl1P10146 Gm27646-201ENSMUST00000183989 110 ntBASIC10.99□□□□□ -0.65
Ccl1P10146 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.99□□□□□ -0.65
Ccl1P10146 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl1P10146 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ccl1P10146 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ccl1P10146 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl1P10146 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl1P10146 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ccl1P10146 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl1P10146 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.98□□□□□ -0.65
Ccl1P10146 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms