Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC21.03■□□□□ 0.96
NclP09405 Ighv8-14-201ENSMUST00000196781 358 ntBASIC21.03■□□□□ 0.96
NclP09405 Gm44608-201ENSMUST00000206827 855 ntBASIC21.03■□□□□ 0.96
NclP09405 Gm7653-201ENSMUST00000214567 508 ntBASIC21.03■□□□□ 0.96
NclP09405 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NclP09405 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NclP09405 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NclP09405 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NclP09405 Gm43509-201ENSMUST00000196551 2594 ntBASIC21.03■□□□□ 0.96
NclP09405 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NclP09405 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NclP09405 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NclP09405 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NclP09405 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC21.02■□□□□ 0.96
NclP09405 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC21.02■□□□□ 0.96
NclP09405 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC21.02■□□□□ 0.96
NclP09405 Gm15823-201ENSMUST00000064305 670 ntBASIC21.02■□□□□ 0.96
NclP09405 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NclP09405 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NclP09405 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NclP09405 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.95
NclP09405 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 AC148324.1-201ENSMUST00000219034 4240 ntBASIC21.01■□□□□ 0.95
NclP09405 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
NclP09405 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NclP09405 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC21.01■□□□□ 0.95
NclP09405 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC21.01■□□□□ 0.95
NclP09405 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC21.01■□□□□ 0.95
NclP09405 Gm4804-201ENSMUST00000182234 999 ntBASIC21.01■□□□□ 0.95
NclP09405 Gm6283-201ENSMUST00000182369 1000 ntBASIC21.01■□□□□ 0.95
NclP09405 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC21.01■□□□□ 0.95
NclP09405 Gm37917-201ENSMUST00000194711 392 ntBASIC21.01■□□□□ 0.95
NclP09405 Gm8515-201ENSMUST00000194852 576 ntBASIC21.01■□□□□ 0.95
NclP09405 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NclP09405 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC21.01■□□□□ 0.95
NclP09405 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NclP09405 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NclP09405 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC21■□□□□ 0.95
NclP09405 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NclP09405 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC21■□□□□ 0.95
NclP09405 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC21■□□□□ 0.95
NclP09405 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NclP09405 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC21■□□□□ 0.95
NclP09405 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Gm18018-201ENSMUST00000198273 408 ntBASIC21■□□□□ 0.95
NclP09405 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC21■□□□□ 0.95
NclP09405 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NclP09405 Gm45668-201ENSMUST00000211271 493 ntBASIC21■□□□□ 0.95
NclP09405 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC21■□□□□ 0.95
NclP09405 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC21■□□□□ 0.95
NclP09405 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NclP09405 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NclP09405 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NclP09405 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC21■□□□□ 0.95
NclP09405 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NclP09405 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
NclP09405 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms