Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.88□□□□□ -0.35
Lmx1bO88609 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Lmx1bO88609 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Gm7730-201ENSMUST00000212486 454 ntBASIC12.88□□□□□ -0.35
Lmx1bO88609 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.88□□□□□ -0.35
Lmx1bO88609 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.88□□□□□ -0.35
Lmx1bO88609 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Lmx1bO88609 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmx1bO88609 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.88□□□□□ -0.35
Lmx1bO88609 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lmx1bO88609 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lmx1bO88609 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lmx1bO88609 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.87□□□□□ -0.35
Lmx1bO88609 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Lmx1bO88609 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.87□□□□□ -0.35
Lmx1bO88609 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Syt7-205ENSMUST00000224135 1557 ntBASIC12.87□□□□□ -0.35
Lmx1bO88609 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.87□□□□□ -0.35
Lmx1bO88609 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.87□□□□□ -0.35
Lmx1bO88609 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lmx1bO88609 Gm45453-201ENSMUST00000211758 853 ntBASIC12.87□□□□□ -0.35
Lmx1bO88609 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Lmx1bO88609 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lmx1bO88609 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Lmx1bO88609 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Lmx1bO88609 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Lmx1bO88609 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Gm27838-201ENSMUST00000184829 128 ntBASIC12.86□□□□□ -0.35
Lmx1bO88609 Gm43703-201ENSMUST00000200523 763 ntBASIC12.86□□□□□ -0.35
Lmx1bO88609 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.86□□□□□ -0.35
Lmx1bO88609 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lmx1bO88609 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lmx1bO88609 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lmx1bO88609 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lmx1bO88609 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmx1bO88609 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.85□□□□□ -0.35
Lmx1bO88609 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lmx1bO88609 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lmx1bO88609 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Lmx1bO88609 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lmx1bO88609 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.85□□□□□ -0.35
Lmx1bO88609 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.85□□□□□ -0.35
Lmx1bO88609 Gm4875-201ENSMUST00000118257 786 ntBASIC12.85□□□□□ -0.35
Lmx1bO88609 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lmx1bO88609 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms