Protein–RNA interactions for Protein: O88574

Sap30, Histone deacetylase complex subunit SAP30, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sap30O88574 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.08□□□□□ -0.64
Sap30O88574 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.08□□□□□ -0.64
Sap30O88574 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.08□□□□□ -0.64
Sap30O88574 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sap30O88574 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sap30O88574 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sap30O88574 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sap30O88574 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Sap30O88574 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Sap30O88574 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.08□□□□□ -0.64
Sap30O88574 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.08□□□□□ -0.64
Sap30O88574 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.08□□□□□ -0.64
Sap30O88574 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sap30O88574 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.07□□□□□ -0.64
Sap30O88574 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sap30O88574 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sap30O88574 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Gm6415-201ENSMUST00000118488 348 ntBASIC11.07□□□□□ -0.64
Sap30O88574 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.07□□□□□ -0.64
Sap30O88574 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Sap30O88574 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.07□□□□□ -0.64
Sap30O88574 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.07□□□□□ -0.64
Sap30O88574 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Efs-202ENSMUST00000227037 2540 ntBASIC11.07□□□□□ -0.64
Sap30O88574 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Matn2-206ENSMUST00000228570 2798 ntBASIC11.07□□□□□ -0.64
Sap30O88574 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
Sap30O88574 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sap30O88574 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sap30O88574 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.06□□□□□ -0.64
Sap30O88574 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sap30O88574 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Sap30O88574 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sap30O88574 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sap30O88574 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sap30O88574 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms