Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cops4O88544 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cops4O88544 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cops4O88544 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cops4O88544 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cops4O88544 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cops4O88544 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Cops4O88544 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Gm13464-201ENSMUST00000119418 935 ntBASIC13.1□□□□□ -0.31
Cops4O88544 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.1□□□□□ -0.31
Cops4O88544 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.1□□□□□ -0.31
Cops4O88544 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Gm8584-201ENSMUST00000171982 758 ntBASIC13.1□□□□□ -0.31
Cops4O88544 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Cops4O88544 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.1□□□□□ -0.31
Cops4O88544 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Gm45167-201ENSMUST00000208007 322 ntBASIC13.1□□□□□ -0.31
Cops4O88544 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.1□□□□□ -0.31
Cops4O88544 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cops4O88544 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.1□□□□□ -0.31
Cops4O88544 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Cops4O88544 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cops4O88544 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cops4O88544 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops4O88544 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cops4O88544 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.09□□□□□ -0.31
Cops4O88544 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.09□□□□□ -0.31
Cops4O88544 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Cops4O88544 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.09□□□□□ -0.31
Cops4O88544 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.09□□□□□ -0.31
Cops4O88544 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.09□□□□□ -0.31
Cops4O88544 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.09□□□□□ -0.31
Cops4O88544 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Gm28659-201ENSMUST00000188013 759 ntBASIC13.09□□□□□ -0.31
Cops4O88544 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.09□□□□□ -0.31
Cops4O88544 Gm5864-201ENSMUST00000202263 970 ntBASIC13.09□□□□□ -0.31
Cops4O88544 Gm10060-201ENSMUST00000212002 111 ntBASIC13.09□□□□□ -0.31
Cops4O88544 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms