Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col5a1O88207 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col5a1O88207 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col5a1O88207 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.62□□□□□ -0.39
Col5a1O88207 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.62□□□□□ -0.39
Col5a1O88207 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col5a1O88207 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col5a1O88207 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Gm6152-201ENSMUST00000151704 340 ntBASIC12.62□□□□□ -0.39
Col5a1O88207 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.62□□□□□ -0.39
Col5a1O88207 Gm24420-201ENSMUST00000176676 59 ntBASIC12.62□□□□□ -0.39
Col5a1O88207 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.62□□□□□ -0.39
Col5a1O88207 Gm27501-201ENSMUST00000183599 107 ntBASIC12.62□□□□□ -0.39
Col5a1O88207 Gm29649-201ENSMUST00000185649 419 ntBASIC12.62□□□□□ -0.39
Col5a1O88207 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Col5a1O88207 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col5a1O88207 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col5a1O88207 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col5a1O88207 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col5a1O88207 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col5a1O88207 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.61□□□□□ -0.39
Col5a1O88207 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Gm13612-201ENSMUST00000119276 390 ntBASIC12.61□□□□□ -0.39
Col5a1O88207 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Col5a1O88207 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.61□□□□□ -0.39
Col5a1O88207 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.61□□□□□ -0.39
Col5a1O88207 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.61□□□□□ -0.39
Col5a1O88207 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.61□□□□□ -0.39
Col5a1O88207 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.61□□□□□ -0.39
Col5a1O88207 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.61□□□□□ -0.39
Col5a1O88207 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.61□□□□□ -0.39
Col5a1O88207 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.61□□□□□ -0.39
Col5a1O88207 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col5a1O88207 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a1O88207 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.61□□□□□ -0.39
Col5a1O88207 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.61□□□□□ -0.39
Col5a1O88207 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.61□□□□□ -0.39
Col5a1O88207 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a1O88207 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a1O88207 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a1O88207 Gm43133-201ENSMUST00000197472 463 ntBASIC12.6□□□□□ -0.39
Col5a1O88207 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Col5a1O88207 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col5a1O88207 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.6□□□□□ -0.39
Col5a1O88207 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Col5a1O88207 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Col5a1O88207 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.6□□□□□ -0.39
Col5a1O88207 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms