Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chrna4O70174 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chrna4O70174 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.34□□□□□ -0.11
Chrna4O70174 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrna4O70174 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrna4O70174 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrna4O70174 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrna4O70174 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chrna4O70174 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrna4O70174 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrna4O70174 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Gm15957-201ENSMUST00000118893 974 ntBASIC14.33□□□□□ -0.12
Chrna4O70174 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.33□□□□□ -0.12
Chrna4O70174 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.33□□□□□ -0.12
Chrna4O70174 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.33□□□□□ -0.12
Chrna4O70174 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chrna4O70174 Mir125a-201ENSMUST00000083545 68 ntBASIC14.33□□□□□ -0.12
Chrna4O70174 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.33□□□□□ -0.12
Chrna4O70174 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna4O70174 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chrna4O70174 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.32□□□□□ -0.12
Chrna4O70174 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Chrna4O70174 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.32□□□□□ -0.12
Chrna4O70174 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.32□□□□□ -0.12
Chrna4O70174 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.32□□□□□ -0.12
Chrna4O70174 Gm15693-201ENSMUST00000120470 637 ntBASIC14.32□□□□□ -0.12
Chrna4O70174 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
Chrna4O70174 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.32□□□□□ -0.12
Chrna4O70174 Gm28630-201ENSMUST00000187806 498 ntBASIC14.32□□□□□ -0.12
Chrna4O70174 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chrna4O70174 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chrna4O70174 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 AA619741-201ENSMUST00000195095 646 ntBASIC14.32□□□□□ -0.12
Chrna4O70174 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.32□□□□□ -0.12
Chrna4O70174 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.32□□□□□ -0.12
Chrna4O70174 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Chrna4O70174 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Chrna4O70174 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Chrna4O70174 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chrna4O70174 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chrna4O70174 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Chrna4O70174 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna4O70174 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.31□□□□□ -0.12
Chrna4O70174 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chrna4O70174 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chrna4O70174 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Chrna4O70174 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chrna4O70174 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.31□□□□□ -0.12
Chrna4O70174 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chrna4O70174 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.31□□□□□ -0.12
Chrna4O70174 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chrna4O70174 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chrna4O70174 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.31□□□□□ -0.12
Chrna4O70174 Dupd1-202ENSMUST00000224735 548 ntBASIC14.31□□□□□ -0.12
Chrna4O70174 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.31□□□□□ -0.12
Chrna4O70174 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms