Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb2O55203 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb2O55203 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb2O55203 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ldb2O55203 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Ldb2O55203 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ldb2O55203 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Gm24543-201ENSMUST00000103867 82 ntBASIC14.11□□□□□ -0.15
Ldb2O55203 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ldb2O55203 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.11□□□□□ -0.15
Ldb2O55203 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.11□□□□□ -0.15
Ldb2O55203 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.11□□□□□ -0.15
Ldb2O55203 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ldb2O55203 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.11□□□□□ -0.15
Ldb2O55203 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.11□□□□□ -0.15
Ldb2O55203 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb2O55203 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ldb2O55203 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ldb2O55203 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ldb2O55203 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ldb2O55203 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ldb2O55203 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ldb2O55203 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.1□□□□□ -0.15
Ldb2O55203 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.1□□□□□ -0.15
Ldb2O55203 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ldb2O55203 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ldb2O55203 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.1□□□□□ -0.15
Ldb2O55203 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.1□□□□□ -0.15
Ldb2O55203 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.1□□□□□ -0.15
Ldb2O55203 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ldb2O55203 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb2O55203 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ldb2O55203 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb2O55203 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ldb2O55203 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ldb2O55203 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Gm27622-201ENSMUST00000183779 60 ntBASIC14.09□□□□□ -0.15
Ldb2O55203 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.09□□□□□ -0.15
Ldb2O55203 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.09□□□□□ -0.15
Ldb2O55203 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.09□□□□□ -0.15
Ldb2O55203 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.09□□□□□ -0.15
Ldb2O55203 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ldb2O55203 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.09□□□□□ -0.15
Ldb2O55203 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ldb2O55203 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb2O55203 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb2O55203 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb2O55203 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms