Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Smarce1O54941 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.86■□□□□ 0.29
Smarce1O54941 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smarce1O54941 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.86■□□□□ 0.29
Smarce1O54941 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.86■□□□□ 0.29
Smarce1O54941 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smarce1O54941 Gm6973-201ENSMUST00000117080 721 ntBASIC16.86■□□□□ 0.29
Smarce1O54941 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.86■□□□□ 0.29
Smarce1O54941 Gm12882-201ENSMUST00000121696 517 ntBASIC16.86■□□□□ 0.29
Smarce1O54941 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.86■□□□□ 0.29
Smarce1O54941 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.86■□□□□ 0.29
Smarce1O54941 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.86■□□□□ 0.29
Smarce1O54941 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Smarce1O54941 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Smarce1O54941 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smarce1O54941 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.86■□□□□ 0.29
Smarce1O54941 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarce1O54941 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.86■□□□□ 0.29
Smarce1O54941 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Smarce1O54941 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.85■□□□□ 0.29
Smarce1O54941 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smarce1O54941 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.85■□□□□ 0.29
Smarce1O54941 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
Smarce1O54941 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smarce1O54941 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Gm15427-201ENSMUST00000117288 531 ntBASIC16.85■□□□□ 0.29
Smarce1O54941 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.85■□□□□ 0.29
Smarce1O54941 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.85■□□□□ 0.29
Smarce1O54941 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.85■□□□□ 0.29
Smarce1O54941 Gm18737-201ENSMUST00000173594 937 ntBASIC16.85■□□□□ 0.29
Smarce1O54941 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smarce1O54941 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.85■□□□□ 0.29
Smarce1O54941 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smarce1O54941 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.85■□□□□ 0.29
Smarce1O54941 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.85■□□□□ 0.29
Smarce1O54941 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarce1O54941 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Smarce1O54941 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.84■□□□□ 0.29
Smarce1O54941 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.84■□□□□ 0.29
Smarce1O54941 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.84■□□□□ 0.29
Smarce1O54941 Gm9727-201ENSMUST00000161387 555 ntBASIC16.84■□□□□ 0.29
Smarce1O54941 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarce1O54941 Gm44492-201ENSMUST00000197012 141 ntBASIC16.84■□□□□ 0.29
Smarce1O54941 Mzt1-203ENSMUST00000227948 952 ntBASIC16.84■□□□□ 0.29
Smarce1O54941 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.84■□□□□ 0.29
Smarce1O54941 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.84■□□□□ 0.29
Smarce1O54941 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarce1O54941 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarce1O54941 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms