Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Brs3O54798 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.74□□□□□ -0.53
Brs3O54798 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Brs3O54798 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Gm14767-201ENSMUST00000121559 586 ntBASIC11.74□□□□□ -0.53
Brs3O54798 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Gm29541-201ENSMUST00000191351 678 ntBASIC11.74□□□□□ -0.53
Brs3O54798 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.74□□□□□ -0.53
Brs3O54798 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Brs3O54798 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.74□□□□□ -0.53
Brs3O54798 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.74□□□□□ -0.53
Brs3O54798 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Brs3O54798 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.74□□□□□ -0.53
Brs3O54798 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Brs3O54798 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.74□□□□□ -0.53
Brs3O54798 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Brs3O54798 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.74□□□□□ -0.53
Brs3O54798 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Brs3O54798 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brs3O54798 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.73□□□□□ -0.53
Brs3O54798 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Brs3O54798 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.73□□□□□ -0.53
Brs3O54798 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.73□□□□□ -0.53
Brs3O54798 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.73□□□□□ -0.53
Brs3O54798 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Gm6222-201ENSMUST00000120787 396 ntBASIC11.73□□□□□ -0.53
Brs3O54798 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Brs3O54798 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Brs3O54798 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.73□□□□□ -0.53
Brs3O54798 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Brs3O54798 Gm6888-201ENSMUST00000221983 706 ntBASIC11.73□□□□□ -0.53
Brs3O54798 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Brs3O54798 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Brs3O54798 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brs3O54798 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Brs3O54798 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.72□□□□□ -0.53
Brs3O54798 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Brs3O54798 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Brs3O54798 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.72□□□□□ -0.53
Brs3O54798 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.72□□□□□ -0.53
Brs3O54798 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.72□□□□□ -0.53
Brs3O54798 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.72□□□□□ -0.53
Brs3O54798 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Gm24543-201ENSMUST00000103867 82 ntBASIC11.72□□□□□ -0.53
Brs3O54798 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brs3O54798 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms