Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tcof1O08784 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.6■□□□□ 0.25
Tcof1O08784 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.6■□□□□ 0.25
Tcof1O08784 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.6■□□□□ 0.25
Tcof1O08784 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tcof1O08784 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tcof1O08784 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tcof1O08784 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Tcof1O08784 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.59■□□□□ 0.25
Tcof1O08784 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Tcof1O08784 Gm7730-201ENSMUST00000212486 454 ntBASIC16.59■□□□□ 0.25
Tcof1O08784 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tcof1O08784 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tcof1O08784 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.59■□□□□ 0.25
Tcof1O08784 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcof1O08784 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tcof1O08784 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.58■□□□□ 0.25
Tcof1O08784 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tcof1O08784 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tcof1O08784 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tcof1O08784 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Tcof1O08784 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.58■□□□□ 0.24
Tcof1O08784 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.58■□□□□ 0.24
Tcof1O08784 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Tcof1O08784 Gm16215-201ENSMUST00000161990 637 ntBASIC16.58■□□□□ 0.24
Tcof1O08784 Gm24694-201ENSMUST00000180054 110 ntBASIC16.58■□□□□ 0.24
Tcof1O08784 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Gm27663-201ENSMUST00000184839 110 ntBASIC16.58■□□□□ 0.24
Tcof1O08784 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.58■□□□□ 0.24
Tcof1O08784 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.58■□□□□ 0.24
Tcof1O08784 Gm33320-201ENSMUST00000192232 530 ntBASIC16.58■□□□□ 0.24
Tcof1O08784 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.58■□□□□ 0.24
Tcof1O08784 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.58■□□□□ 0.24
Tcof1O08784 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.58■□□□□ 0.24
Tcof1O08784 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Tcof1O08784 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcof1O08784 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.57■□□□□ 0.24
Tcof1O08784 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tcof1O08784 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Gm7488-201ENSMUST00000117148 684 ntBASIC16.57■□□□□ 0.24
Tcof1O08784 Gm15460-201ENSMUST00000118147 391 ntBASIC16.57■□□□□ 0.24
Tcof1O08784 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tcof1O08784 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Tcof1O08784 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tcof1O08784 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.57■□□□□ 0.24
Tcof1O08784 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.57■□□□□ 0.24
Tcof1O08784 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tcof1O08784 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tcof1O08784 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.57■□□□□ 0.24
Tcof1O08784 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tcof1O08784 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tcof1O08784 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcof1O08784 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.56■□□□□ 0.24
Tcof1O08784 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcof1O08784 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcof1O08784 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcof1O08784 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcof1O08784 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms