Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm9728-201ENSMUST00000200197 1055 ntBASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Gm7553-201ENSMUST00000185805 1426 ntBASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Pcf11G3X9Z4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Gm22018-201ENSMUST00000104357 131 ntBASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Gm42693-201ENSMUST00000196779 631 ntBASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 AC126253.1-201ENSMUST00000227974 824 ntBASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcf11G3X9Z4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Gm43118-201ENSMUST00000199149 775 ntBASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Gm18054-201ENSMUST00000207539 555 ntBASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Gm29705-201ENSMUST00000212598 474 ntBASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcf11G3X9Z4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Gm12620-201ENSMUST00000119791 1986 ntBASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Gm12612-201ENSMUST00000140182 1986 ntBASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Dctn4-202ENSMUST00000223590 1530 ntBASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcf11G3X9Z4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Gm7029-201ENSMUST00000173226 450 ntBASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms