Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Gm18737-201ENSMUST00000173594 937 ntBASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh9F8VPK8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh9F8VPK8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh9F8VPK8 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.52□□□□□ -0.09
Pcdh9F8VPK8 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.52□□□□□ -0.09
Pcdh9F8VPK8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdh9F8VPK8 Gm11025-201ENSMUST00000140773 466 ntBASIC14.52□□□□□ -0.09
Pcdh9F8VPK8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms