Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc188F6WEU2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Gm14208-201ENSMUST00000119645 678 ntBASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Gm11591-201ENSMUST00000120063 702 ntBASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Gm11964-201ENSMUST00000120982 444 ntBASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Itm2b-204ENSMUST00000228637 783 ntBASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc188F6WEU2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Gm9083-201ENSMUST00000120423 819 ntBASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Gm43058-201ENSMUST00000197645 625 ntBASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Gm44545-201ENSMUST00000208262 746 ntBASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc188F6WEU2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms