Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf11E9PZM7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.49■□□□□ 0.71
Scaf11E9PZM7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Gm42929-201ENSMUST00000198374 1286 ntBASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf11E9PZM7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf11E9PZM7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm2606-201ENSMUST00000100754 1002 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm12537-201ENSMUST00000119266 1002 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm12070-201ENSMUST00000119551 1002 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm12671-201ENSMUST00000119978 1002 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm13292-201ENSMUST00000120014 1000 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm20482-202ENSMUST00000174729 825 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm10359-201ENSMUST00000180167 1002 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm12033-201ENSMUST00000180654 1002 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm5559-201ENSMUST00000180755 1002 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Gm7293-201ENSMUST00000216682 1007 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 AC102291.3-201ENSMUST00000226566 405 ntBASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf11E9PZM7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 CT030182.1-201ENSMUST00000225935 533 ntBASIC19.45■□□□□ 0.7
Scaf11E9PZM7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Gm42632-201ENSMUST00000201707 2411 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms