Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Gm38000-201ENSMUST00000192390 1215 ntBASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Gm38158-201ENSMUST00000194617 339 ntBASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 AC132317.1-201ENSMUST00000227227 962 ntBASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Gm11618-201ENSMUST00000117946 267 ntBASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hfm1D3Z4R1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hfm1D3Z4R1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hfm1D3Z4R1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hfm1D3Z4R1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hfm1D3Z4R1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hfm1D3Z4R1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hfm1D3Z4R1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm12537-201ENSMUST00000119266 1002 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm12070-201ENSMUST00000119551 1002 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm12671-201ENSMUST00000119978 1002 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm13292-201ENSMUST00000120014 1000 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm12403-201ENSMUST00000121384 959 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm10359-201ENSMUST00000180167 1002 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm12033-201ENSMUST00000180654 1002 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm5559-201ENSMUST00000180755 1002 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm4335-201ENSMUST00000182581 1004 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm8227-201ENSMUST00000223306 571 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Gm10146-201ENSMUST00000072739 309 ntBASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hfm1D3Z4R1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 n-R5s195-201ENSMUST00000082891 119 ntBASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hfm1D3Z4R1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms