Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Gm13015-201ENSMUST00000118674 204 ntBASIC13.8□□□□□ -0.2
Clip3B9EHT4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.8□□□□□ -0.2
Clip3B9EHT4 Gm20949-201ENSMUST00000206478 952 ntBASIC13.8□□□□□ -0.2
Clip3B9EHT4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.8□□□□□ -0.2
Clip3B9EHT4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.79□□□□□ -0.2
Clip3B9EHT4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.79□□□□□ -0.2
Clip3B9EHT4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Clip3B9EHT4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Gm38294-201ENSMUST00000192831 381 ntBASIC13.78□□□□□ -0.2
Clip3B9EHT4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clip3B9EHT4 Matn2-206ENSMUST00000228570 2798 ntBASIC13.78□□□□□ -0.2
Clip3B9EHT4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms