Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Gm10146-201ENSMUST00000072739 309 ntBASIC17.94■□□□□ 0.46
Scn7aB1AYL1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn7aB1AYL1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Gm1335-201ENSMUST00000121653 386 ntBASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn7aB1AYL1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.92■□□□□ 0.46
Scn7aB1AYL1 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.92■□□□□ 0.46
Scn7aB1AYL1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn7aB1AYL1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scn7aB1AYL1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Gm16202-201ENSMUST00000117532 544 ntBASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn7aB1AYL1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms