Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm12795-201ENSMUST00000117594 539 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm37905-201ENSMUST00000195310 341 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm12029-201ENSMUST00000120073 832 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.37□□□□□ -0.59
Chd6A3KFM7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.36□□□□□ -0.59
Chd6A3KFM7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Gm23218-201ENSMUST00000158124 276 ntBASIC11.36□□□□□ -0.59
Chd6A3KFM7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Morn2-202ENSMUST00000227729 656 ntBASIC11.36□□□□□ -0.59
Chd6A3KFM7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.36□□□□□ -0.59
Chd6A3KFM7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Gm8768-201ENSMUST00000220020 826 ntBASIC11.36□□□□□ -0.59
Chd6A3KFM7 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.36□□□□□ -0.59
Chd6A3KFM7 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.36□□□□□ -0.59
Chd6A3KFM7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd6A3KFM7 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.36□□□□□ -0.59
Chd6A3KFM7 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.35□□□□□ -0.59
Chd6A3KFM7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Gm10461-201ENSMUST00000202073 4786 ntBASIC11.35□□□□□ -0.59
Chd6A3KFM7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Gm13611-201ENSMUST00000118269 318 ntBASIC11.35□□□□□ -0.59
Chd6A3KFM7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.35□□□□□ -0.59
Chd6A3KFM7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.35□□□□□ -0.59
Chd6A3KFM7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.35□□□□□ -0.59
Chd6A3KFM7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd6A3KFM7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms