Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.8□□□□□ -0.04
Scn1aA2APX8 Gm12138-201ENSMUST00000122180 951 ntBASIC14.8□□□□□ -0.04
Scn1aA2APX8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.79□□□□□ -0.04
Scn1aA2APX8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.79□□□□□ -0.04
Scn1aA2APX8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Gm14928-201ENSMUST00000120198 477 ntBASIC14.79□□□□□ -0.04
Scn1aA2APX8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Gm18905-201ENSMUST00000205454 928 ntBASIC14.79□□□□□ -0.04
Scn1aA2APX8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1aA2APX8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.78□□□□□ -0.04
Scn1aA2APX8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.78□□□□□ -0.04
Scn1aA2APX8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Gm12341-201ENSMUST00000119724 503 ntBASIC14.78□□□□□ -0.04
Scn1aA2APX8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Gm9794-201ENSMUST00000202370 423 ntBASIC14.78□□□□□ -0.04
Scn1aA2APX8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1aA2APX8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1aA2APX8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1aA2APX8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1aA2APX8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.77□□□□□ -0.04
Scn1aA2APX8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1aA2APX8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms