Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Gm10710-201ENSMUST00000047876 3971 ntBASIC7.3□□□□□ -1.24
Ubr4A2AN08 Gm11930-201ENSMUST00000117788 190 ntBASIC7.3□□□□□ -1.24
Ubr4A2AN08 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Gm11618-201ENSMUST00000117946 267 ntBASIC7.3□□□□□ -1.24
Ubr4A2AN08 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Gm37028-201ENSMUST00000194276 107 ntBASIC7.3□□□□□ -1.24
Ubr4A2AN08 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Olfr286-202ENSMUST00000205305 969 ntBASIC7.3□□□□□ -1.24
Ubr4A2AN08 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ubr4A2AN08 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm7114-201ENSMUST00000190159 1789 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm9062-201ENSMUST00000117712 727 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm19091-201ENSMUST00000208120 978 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm18466-201ENSMUST00000209147 499 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm14730-201ENSMUST00000122378 1045 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm3329-201ENSMUST00000159873 556 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm3765-201ENSMUST00000130985 1447 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm10051-201ENSMUST00000145209 414 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm20694-201ENSMUST00000176943 404 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 Gm6644-201ENSMUST00000186507 951 ntBASIC7.29□□□□□ -1.24
Ubr4A2AN08 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC7.29□□□□□ -1.24
Ubr4A2AN08 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms