Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim17A0A504 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim17A0A504 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim17A0A504 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smim17A0A504 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smim17A0A504 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.85□□□□□ -0.35
Smim17A0A504 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Smim17A0A504 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smim17A0A504 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smim17A0A504 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Mir770-201ENSMUST00000103252 94 ntBASIC12.85□□□□□ -0.35
Smim17A0A504 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.85□□□□□ -0.35
Smim17A0A504 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.85□□□□□ -0.35
Smim17A0A504 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.85□□□□□ -0.35
Smim17A0A504 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Smim17A0A504 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
Smim17A0A504 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smim17A0A504 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smim17A0A504 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Smim17A0A504 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smim17A0A504 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smim17A0A504 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smim17A0A504 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.84□□□□□ -0.35
Smim17A0A504 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smim17A0A504 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Smim17A0A504 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smim17A0A504 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.84□□□□□ -0.35
Smim17A0A504 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smim17A0A504 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Gm9013-201ENSMUST00000132939 882 ntBASIC12.84□□□□□ -0.35
Smim17A0A504 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.84□□□□□ -0.35
Smim17A0A504 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smim17A0A504 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smim17A0A504 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Smim17A0A504 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Smim17A0A504 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smim17A0A504 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smim17A0A504 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smim17A0A504 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smim17A0A504 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smim17A0A504 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smim17A0A504 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Smim17A0A504 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms