Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lnp1A0A1B0GSK3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm43575-201ENSMUST00000196420 516 ntBASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lnp1A0A1B0GSK3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm23935-201ENSMUST00000102303 57 ntBASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm24270-201ENSMUST00000102326 57 ntBASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm24245-201ENSMUST00000157318 57 ntBASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm29310-201ENSMUST00000185468 696 ntBASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm21825-201ENSMUST00000185728 696 ntBASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm29109-201ENSMUST00000185895 696 ntBASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm21896-201ENSMUST00000186520 696 ntBASIC11.8□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm21873-201ENSMUST00000186728 696 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms