Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Gm44492-201ENSMUST00000197012 141 ntBASIC11.64□□□□□ -0.55
Trav18A0A075B656 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav18A0A075B656 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Rpph1-201ENSMUST00000175096 319 ntBASIC11.63□□□□□ -0.55
Trav18A0A075B656 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.63□□□□□ -0.55
Trav18A0A075B656 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.63□□□□□ -0.55
Trav18A0A075B656 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.63□□□□□ -0.55
Trav18A0A075B656 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.63□□□□□ -0.55
Trav18A0A075B656 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav18A0A075B656 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.62□□□□□ -0.55
Trav18A0A075B656 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Gm10275-202ENSMUST00000168697 495 ntBASIC11.62□□□□□ -0.55
Trav18A0A075B656 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav18A0A075B656 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.62□□□□□ -0.55
Trav18A0A075B656 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms