Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Gm10013-201ENSMUST00000106074 672 ntBASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav8-1A0A075B641 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Gm6433-201ENSMUST00000118634 875 ntBASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Gm18032-201ENSMUST00000222541 538 ntBASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav8-1A0A075B641 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms