Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Gm7222-201ENSMUST00000117512 906 ntBASIC10.92□□□□□ -0.66
PdfS4R2K0 Gm8097-201ENSMUST00000117903 829 ntBASIC10.92□□□□□ -0.66
PdfS4R2K0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
PdfS4R2K0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Gm8318-201ENSMUST00000182954 872 ntBASIC10.92□□□□□ -0.66
PdfS4R2K0 Gm2651-201ENSMUST00000203560 838 ntBASIC10.92□□□□□ -0.66
PdfS4R2K0 Gm7506-201ENSMUST00000207758 815 ntBASIC10.92□□□□□ -0.66
PdfS4R2K0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.92□□□□□ -0.66
PdfS4R2K0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.92□□□□□ -0.66
PdfS4R2K0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PdfS4R2K0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
PdfS4R2K0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
PdfS4R2K0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
PdfS4R2K0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.91□□□□□ -0.66
PdfS4R2K0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44357-201ENSMUST00000195897 142 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm19658-201ENSMUST00000196231 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44367-201ENSMUST00000196836 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44350-201ENSMUST00000197197 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44390-201ENSMUST00000197533 144 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44313-201ENSMUST00000198018 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44486-201ENSMUST00000198508 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44314-201ENSMUST00000199263 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44394-201ENSMUST00000199558 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44484-201ENSMUST00000199873 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44466-201ENSMUST00000200264 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm44359-201ENSMUST00000200671 138 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Gm18622-201ENSMUST00000219361 595 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
PdfS4R2K0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.91□□□□□ -0.66
PdfS4R2K0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
PdfS4R2K0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
PdfS4R2K0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.91□□□□□ -0.66
PdfS4R2K0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
PdfS4R2K0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PdfS4R2K0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
PdfS4R2K0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PdfS4R2K0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms