Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Psmb5-202ENSMUST00000227257 622 ntBASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb3S4R1G7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Gm5479-201ENSMUST00000160578 435 ntBASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Gm45747-201ENSMUST00000212203 999 ntBASIC12.8□□□□□ -0.36
H2afb3S4R1G7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb3S4R1G7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Gm37230-201ENSMUST00000194491 818 ntBASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb3S4R1G7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms