Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Gm14928-201ENSMUST00000120198 477 ntBASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Gm18624-201ENSMUST00000220966 658 ntBASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcb1Q9Z0H3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Gm12490-201ENSMUST00000120255 560 ntBASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Gm5279-201ENSMUST00000199575 745 ntBASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcb1Q9Z0H3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcb1Q9Z0H3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms