Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Gm4875-201ENSMUST00000118257 786 ntBASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Gm12882-201ENSMUST00000121696 517 ntBASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Gm3436-201ENSMUST00000179930 840 ntBASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Gm29667-201ENSMUST00000190817 490 ntBASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Gm43703-201ENSMUST00000200523 763 ntBASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx9Q9WUH2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lhx9Q9WUH2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 BC001981-202ENSMUST00000191393 1545 ntBASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx9Q9WUH2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms